Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AC004890.2-204ENST00000481968 304 ntBASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AL079307.3-201ENST00000556114 283 ntBASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TEX28P1-201ENST00000613479 1221 ntBASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TEX28P2-201ENST00000617764 1221 ntBASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 AC236430.1-201ENST00000402231 743 ntBASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 TSSK5P-201ENST00000423978 907 ntBASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 AL365330.1-201ENST00000607459 531 ntBASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCN4BQ8IWT1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 FER1L4-210ENST00000615531 5998 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms