Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC008677.1-201ENST00000519230 1561 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 MED15P5-201ENST00000423150 992 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC002347.1-201ENST00000569543 541 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AP002472.1-201ENST00000577490 586 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC027601.4-201ENST00000611259 610 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC120114.3-201ENST00000611923 658 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AL513190.1-201ENST00000621254 727 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AL589702.1-201ENST00000641229 1509 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 AC132872.4-202ENST00000622924 2756 ntBASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKL3Q8IVW4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AC140113.2-201ENST00000604370 208 ntBASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKL3Q8IVW4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL3Q8IVW4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL3Q8IVW4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
CDKL3Q8IVW4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL3Q8IVW4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms