Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00346Q8IVM7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00346Q8IVM7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.46□□□□□ -0.1
LINC00346Q8IVM7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AC004877.2-201ENST00000623941 599 ntBASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00346Q8IVM7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 U82695.1-201ENST00000635752 1889 ntBASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 CDC14C-201ENST00000428251 1719 ntBASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 KRT18P2-201ENST00000447938 1258 ntBASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 RPL13AP23-201ENST00000480739 586 ntBASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 AC145285.3-201ENST00000564603 959 ntBASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LINC00346Q8IVM7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 IL9RP2-201ENST00000423948 1312 ntBASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms