Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 CDC14C-201ENST00000428251 1719 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 AL022342.1-201ENST00000400363 863 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 AC112504.1-201ENST00000623415 1841 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 NCF1C-201ENST00000438382 1427 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 LINC02447-202ENST00000501888 2146 ntBASIC14.56□□□□□ -0.08
LRRC28Q86X40 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC004706.3-202ENST00000621574 984 ntBASIC14.55□□□□□ -0.08
LRRC28Q86X40 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 AC006277.1-201ENST00000624348 1610 ntBASIC14.55□□□□□ -0.08
LRRC28Q86X40 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRRC28Q86X40 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRC28Q86X40 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms