Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 AL160237.2-201ENST00000556165 472 ntBASIC15.03■□□□□ -0
TMEM53Q6P2H8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 TP73-AS1-207ENST00000624167 988 ntBASIC15.03■□□□□ -0
TMEM53Q6P2H8 AC107918.4-202ENST00000641623 219 ntBASIC15.03■□□□□ -0
TMEM53Q6P2H8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 LINC02012-201ENST00000608206 1725 ntBASIC15.03■□□□□ -0
TMEM53Q6P2H8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.03■□□□□ -0
TMEM53Q6P2H8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM53Q6P2H8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM53Q6P2H8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 RPS2P1-201ENST00000434010 821 ntBASIC15.02■□□□□ -0
TMEM53Q6P2H8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 MIR1199-201ENST00000621445 119 ntBASIC15.02■□□□□ -0
TMEM53Q6P2H8 AC004706.3-202ENST00000621574 984 ntBASIC15.02■□□□□ -0
TMEM53Q6P2H8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.02■□□□□ -0
TMEM53Q6P2H8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM53Q6P2H8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms