Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 AL033527.5-202ENST00000641632 1098 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 AL691432.1-201ENST00000596308 1422 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AC092364.2-201ENST00000596710 2692 ntBASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AL662844.4-201ENST00000606367 2838 ntBASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 AC004840.1-201ENST00000636359 365 ntBASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SWSAP1Q6NVH7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 SERBP1P3-201ENST00000459980 809 ntBASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC044860.1-202ENST00000559481 777 ntBASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 AC009118.2-201ENST00000613275 655 ntBASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.02■□□□□ 0.48
SWSAP1Q6NVH7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SWSAP1Q6NVH7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SWSAP1Q6NVH7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SWSAP1Q6NVH7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms