Protein–RNA interactions for Protein: Q68G74

LHX8, LIM/homeobox protein Lhx8, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX8Q68G74 AP001981.1-201ENST00000531132 738 ntBASIC17.81■□□□□ 0.44
LHX8Q68G74 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LHX8Q68G74 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX8Q68G74 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX8Q68G74 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.81■□□□□ 0.44
LHX8Q68G74 AC106872.11-201ENST00000605838 421 ntBASIC17.81■□□□□ 0.44
LHX8Q68G74 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX8Q68G74 AP003400.5-201ENST00000624827 617 ntBASIC17.81■□□□□ 0.44
LHX8Q68G74 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LHX8Q68G74 AL603756.1-201ENST00000606511 2163 ntBASIC17.81■□□□□ 0.44
LHX8Q68G74 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LHX8Q68G74 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.81■□□□□ 0.44
LHX8Q68G74 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX8Q68G74 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX8Q68G74 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX8Q68G74 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX8Q68G74 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 CNN2P8-201ENST00000421872 913 ntBASIC17.8■□□□□ 0.44
LHX8Q68G74 CALR4P-201ENST00000431943 946 ntBASIC17.8■□□□□ 0.44
LHX8Q68G74 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.8■□□□□ 0.44
LHX8Q68G74 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LHX8Q68G74 VDAC1P7-201ENST00000462417 847 ntBASIC17.8■□□□□ 0.44
LHX8Q68G74 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.8■□□□□ 0.44
LHX8Q68G74 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.8■□□□□ 0.44
LHX8Q68G74 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LHX8Q68G74 RN7SL190P-201ENST00000582519 257 ntBASIC17.8■□□□□ 0.44
LHX8Q68G74 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
LHX8Q68G74 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LHX8Q68G74 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX8Q68G74 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
LHX8Q68G74 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX8Q68G74 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX8Q68G74 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 SLC25A24P2-201ENST00000415059 510 ntBASIC17.79■□□□□ 0.44
LHX8Q68G74 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 AP001258.2-201ENST00000529891 490 ntBASIC17.79■□□□□ 0.44
LHX8Q68G74 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.79■□□□□ 0.44
LHX8Q68G74 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.79■□□□□ 0.44
LHX8Q68G74 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.79■□□□□ 0.44
LHX8Q68G74 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX8Q68G74 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.79■□□□□ 0.44
LHX8Q68G74 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX8Q68G74 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms