Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 LOX-206ENST00000639739 1626 ntTSL 5 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AC010328.2-201ENST00000597698 1111 ntBASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 AC004945.1-201ENST00000416738 983 ntBASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 AC005695.3-201ENST00000614522 232 ntBASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 LRRFIP1P1-201ENST00000498774 2246 ntBASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPAQ5VT25 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 ALOX12P2-203ENST00000570921 1945 ntBASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 GUK1-206ENST00000366723 845 ntTSL 5 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC24.08■■□□□ 1.45
CDC42BPAQ5VT25 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC24.08■■□□□ 1.44
CDC42BPAQ5VT25 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 RPL8-205ENST00000527914 551 ntTSL 3 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 GPX4-206ENST00000588919 803 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPAQ5VT25 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 UBL5-208ENST00000593087 320 ntTSL 3 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 KLK3-211ENST00000597483 810 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 AC093813.1-201ENST00000605066 256 ntBASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms