Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 DBET-201ENST00000630918 3363 ntBASIC16.47■□□□□ 0.23
LGSNQ5TDP6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 FGFR3P6-201ENST00000457012 610 ntBASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AC008608.2-201ENST00000606089 416 ntBASIC16.47■□□□□ 0.23
LGSNQ5TDP6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AC073347.1-201ENST00000421633 2643 ntBASIC16.47■□□□□ 0.23
LGSNQ5TDP6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LGSNQ5TDP6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 AC012569.1-201ENST00000591191 1524 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 ELK2BP-201ENST00000415014 1224 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 RPS15P9-201ENST00000494093 319 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 AL160237.2-201ENST00000556165 472 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LGSNQ5TDP6 AC016027.1-202ENST00000607927 1699 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 AC006058.4-201ENST00000624016 1670 ntBASIC16.46■□□□□ 0.23
LGSNQ5TDP6 OR2I1P-210ENST00000642037 4691 ntBASIC16.46■□□□□ 0.22
LGSNQ5TDP6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
LGSNQ5TDP6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
LGSNQ5TDP6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LGSNQ5TDP6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms