Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC002310.6-201ENST00000624451 1377 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATPAF1Q5TC12 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AL590627.1-203ENST00000421194 1026 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 SLC25A6P2-201ENST00000497974 877 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 Z83851.2-201ENST00000609564 659 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AC010654.1-201ENST00000615722 808 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 REXO1L3P-201ENST00000622202 1288 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AC004790.2-201ENST00000623588 572 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TOP3BP1-201ENST00000420768 1380 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 LINC00895-201ENST00000629028 1637 ntBASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ATPAF1Q5TC12 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 MIR600HG-201ENST00000449175 5984 ntBASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 AC013268.4-201ENST00000637413 2228 ntBASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 KRT8P49-201ENST00000604166 1432 ntBASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 RPL13AP23-201ENST00000480739 586 ntBASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms