Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 AC005052.1-201ENST00000625181 2492 ntBASIC17.17■□□□□ 0.34
VARS2Q5ST30 AL109936.8-201ENST00000641772 604 ntBASIC17.17■□□□□ 0.34
VARS2Q5ST30 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 FLJ38576-201ENST00000623820 2459 ntBASIC17.16■□□□□ 0.34
VARS2Q5ST30 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 AC245100.3-201ENST00000441281 285 ntBASIC17.16■□□□□ 0.34
VARS2Q5ST30 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 TP53TG3HP-202ENST00000569755 579 ntBASIC17.16■□□□□ 0.34
VARS2Q5ST30 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VARS2Q5ST30 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.16■□□□□ 0.34
VARS2Q5ST30 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 PCDHA12-202ENST00000613593 2588 ntBASIC17.15■□□□□ 0.34
VARS2Q5ST30 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 DFFBP1-201ENST00000433250 979 ntBASIC17.15■□□□□ 0.34
VARS2Q5ST30 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 AL136370.1-201ENST00000608166 691 ntBASIC17.15■□□□□ 0.34
VARS2Q5ST30 AC004461.2-201ENST00000629517 803 ntBASIC17.15■□□□□ 0.34
VARS2Q5ST30 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.15■□□□□ 0.34
VARS2Q5ST30 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VARS2Q5ST30 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
VARS2Q5ST30 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VARS2Q5ST30 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
VARS2Q5ST30 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms