Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ANKRD55Q3KP44 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 CICP13-201ENST00000422015 2789 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC131009.4-201ENST00000624048 1740 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AL592424.1-201ENST00000563624 1536 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 HCG4P8-203ENST00000443049 980 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 Z69720.1-201ENST00000601483 472 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC026748.1-201ENST00000624349 3251 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC126755.1-201ENST00000525846 6405 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 AC016734.2-201ENST00000624325 1377 ntBASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ANKRD55Q3KP44 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 RCN1P2-201ENST00000398357 915 ntBASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 CYP2A7P1-201ENST00000595391 815 ntBASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 AC073592.4-201ENST00000623827 446 ntBASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ANKRD55Q3KP44 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms