Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC025580.3-201ENST00000617932 1424 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC109635.5-201ENST00000533593 962 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC004877.2-201ENST00000623941 599 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC007064.4-201ENST00000637740 555 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HMGCS1Q01581 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 BCAR1-209ENST00000546196 1340 ntBASIC15.71■□□□□ 0.11
HMGCS1Q01581 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AC016027.1-202ENST00000607927 1699 ntBASIC15.71■□□□□ 0.11
HMGCS1Q01581 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AC093724.1-201ENST00000448659 1027 ntBASIC15.71■□□□□ 0.11
HMGCS1Q01581 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 AC064836.3-201ENST00000607928 673 ntBASIC15.71■□□□□ 0.11
HMGCS1Q01581 AC120114.3-201ENST00000611923 658 ntBASIC15.71■□□□□ 0.11
HMGCS1Q01581 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCS1Q01581 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HMGCS1Q01581 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGCS1Q01581 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGCS1Q01581 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGCS1Q01581 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms