Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.56□□□□□ -0.08
ACTA1P68133 SART3-203ENST00000546611 1184 ntBASIC14.56□□□□□ -0.08
ACTA1P68133 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 AC021097.1-201ENST00000607902 574 ntBASIC14.56□□□□□ -0.08
ACTA1P68133 AL732292.2-201ENST00000609649 430 ntBASIC14.56□□□□□ -0.08
ACTA1P68133 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ACTA1P68133 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.55□□□□□ -0.08
ACTA1P68133 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 TMBIM7P-203ENST00000641617 1718 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 FGFR3P6-201ENST00000457012 610 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 RPS15P9-201ENST00000494093 319 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 FOSL1P1-201ENST00000511041 816 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.55□□□□□ -0.08
ACTA1P68133 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.55□□□□□ -0.08
ACTA1P68133 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.55□□□□□ -0.08
ACTA1P68133 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.55□□□□□ -0.08
ACTA1P68133 AC008608.2-201ENST00000606089 416 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.55□□□□□ -0.08
ACTA1P68133 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 AC012569.1-201ENST00000591191 1524 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.55□□□□□ -0.08
ACTA1P68133 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ACTA1P68133 AC020658.6-201ENST00000623564 1870 ntBASIC14.55□□□□□ -0.08
ACTA1P68133 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ACTA1P68133 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ACTA1P68133 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.54□□□□□ -0.08
ACTA1P68133 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
ACTA1P68133 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.54□□□□□ -0.08
ACTA1P68133 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
ACTA1P68133 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
ACTA1P68133 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ACTA1P68133 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.54□□□□□ -0.08
ACTA1P68133 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms