Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.87■□□□□ 0.13
YBX1P67809 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 AC027307.2-201ENST00000591252 911 ntBASIC15.87■□□□□ 0.13
YBX1P67809 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 AL513477.1-201ENST00000602865 2407 ntBASIC15.87■□□□□ 0.13
YBX1P67809 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
YBX1P67809 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 AC013268.4-201ENST00000637413 2228 ntBASIC15.87■□□□□ 0.13
YBX1P67809 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 AC073347.1-201ENST00000421633 2643 ntBASIC15.86■□□□□ 0.13
YBX1P67809 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.86■□□□□ 0.13
YBX1P67809 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 AC005622.1-201ENST00000636801 1703 ntBASIC15.86■□□□□ 0.13
YBX1P67809 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 AC068418.2-201ENST00000577309 3703 ntBASIC15.86■□□□□ 0.13
YBX1P67809 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.86■□□□□ 0.13
YBX1P67809 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 AC006449.6-201ENST00000612330 2296 ntBASIC15.86■□□□□ 0.13
YBX1P67809 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 FAM58DP-201ENST00000428076 619 ntBASIC15.86■□□□□ 0.13
YBX1P67809 AL592309.1-201ENST00000443127 649 ntBASIC15.86■□□□□ 0.13
YBX1P67809 AP006288.1-201ENST00000446065 395 ntBASIC15.86■□□□□ 0.13
YBX1P67809 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.86■□□□□ 0.13
YBX1P67809 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 FAM86C2P-203ENST00000528684 1004 ntBASIC15.86■□□□□ 0.13
YBX1P67809 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.86■□□□□ 0.13
YBX1P67809 AC027612.4-201ENST00000605371 583 ntBASIC15.86■□□□□ 0.13
YBX1P67809 AC020765.3-201ENST00000613051 740 ntBASIC15.86■□□□□ 0.13
YBX1P67809 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
YBX1P67809 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
YBX1P67809 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
YBX1P67809 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
YBX1P67809 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
YBX1P67809 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
YBX1P67809 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.86■□□□□ 0.13
YBX1P67809 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.85■□□□□ 0.13
YBX1P67809 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
YBX1P67809 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.85■□□□□ 0.13
YBX1P67809 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.85■□□□□ 0.13
YBX1P67809 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.85■□□□□ 0.13
YBX1P67809 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.85■□□□□ 0.13
YBX1P67809 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.85■□□□□ 0.13
YBX1P67809 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.85■□□□□ 0.13
YBX1P67809 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.85■□□□□ 0.13
YBX1P67809 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
YBX1P67809 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
YBX1P67809 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.85■□□□□ 0.13
YBX1P67809 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms