Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.04■□□□□ 0.64
RHBDL3P58872 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.04■□□□□ 0.64
RHBDL3P58872 AL008721.1-201ENST00000609964 604 ntBASIC19.04■□□□□ 0.64
RHBDL3P58872 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RHBDL3P58872 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.04■□□□□ 0.64
RHBDL3P58872 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RHBDL3P58872 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 AP001282.1-201ENST00000531301 1499 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 HTR7P1-202ENST00000624664 4411 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 BCL2-203ENST00000589955 5011 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.03■□□□□ 0.64
RHBDL3P58872 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 AC026471.1-201ENST00000564629 3026 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.03■□□□□ 0.64
RHBDL3P58872 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.03■□□□□ 0.64
RHBDL3P58872 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.03■□□□□ 0.64
RHBDL3P58872 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.03■□□□□ 0.64
RHBDL3P58872 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 HILS1-202ENST00000545329 423 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.03■□□□□ 0.64
RHBDL3P58872 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.03■□□□□ 0.64
RHBDL3P58872 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RHBDL3P58872 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 RPSAP52-203ENST00000622976 1023 ntBASIC19.03■□□□□ 0.64
RHBDL3P58872 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RHBDL3P58872 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDL3P58872 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.02■□□□□ 0.64
RHBDL3P58872 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RHBDL3P58872 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RHBDL3P58872 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RHBDL3P58872 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RHBDL3P58872 HAUS4P1-201ENST00000406739 1145 ntBASIC19.02■□□□□ 0.64
RHBDL3P58872 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 KRT18P64-201ENST00000434946 1219 ntBASIC19.02■□□□□ 0.64
RHBDL3P58872 RN7SL399P-201ENST00000471648 279 ntBASIC19.02■□□□□ 0.64
RHBDL3P58872 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 AC092552.1-201ENST00000547243 906 ntBASIC19.02■□□□□ 0.64
RHBDL3P58872 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.02■□□□□ 0.64
RHBDL3P58872 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.02■□□□□ 0.64
RHBDL3P58872 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
RHBDL3P58872 AL162274.1-201ENST00000617191 1098 ntBASIC19.02■□□□□ 0.64
RHBDL3P58872 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.02■□□□□ 0.64
RHBDL3P58872 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RHBDL3P58872 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDL3P58872 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
RHBDL3P58872 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDL3P58872 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.02■□□□□ 0.63
RHBDL3P58872 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
RHBDL3P58872 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDL3P58872 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDL3P58872 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RHBDL3P58872 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
RHBDL3P58872 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms