Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.68■□□□□ 0.9
BRPF1P55201 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
BRPF1P55201 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BRPF1P55201 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 KRT18P32-201ENST00000424695 1287 ntBASIC20.67■□□□□ 0.9
BRPF1P55201 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.67■□□□□ 0.9
BRPF1P55201 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.67■□□□□ 0.9
BRPF1P55201 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
BRPF1P55201 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
BRPF1P55201 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.67■□□□□ 0.9
BRPF1P55201 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRPF1P55201 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
BRPF1P55201 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 RNA5SP410-201ENST00000516285 106 ntBASIC20.66■□□□□ 0.9
BRPF1P55201 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 AC026150.2-201ENST00000564693 1156 ntBASIC20.66■□□□□ 0.9
BRPF1P55201 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.66■□□□□ 0.9
BRPF1P55201 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.66■□□□□ 0.9
BRPF1P55201 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.66■□□□□ 0.9
BRPF1P55201 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.66■□□□□ 0.9
BRPF1P55201 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.66■□□□□ 0.9
BRPF1P55201 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRPF1P55201 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRPF1P55201 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.65■□□□□ 0.9
BRPF1P55201 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.65■□□□□ 0.9
BRPF1P55201 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 MEIS3P1-201ENST00000495167 958 ntBASIC20.65■□□□□ 0.9
BRPF1P55201 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 DUX4L27-201ENST00000554796 1261 ntBASIC20.65■□□□□ 0.9
BRPF1P55201 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.65■□□□□ 0.9
BRPF1P55201 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BRPF1P55201 RN7SL204P-201ENST00000582831 262 ntBASIC20.65■□□□□ 0.9
BRPF1P55201 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 AL359881.2-201ENST00000602973 570 ntBASIC20.65■□□□□ 0.9
BRPF1P55201 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.65■□□□□ 0.9
BRPF1P55201 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRPF1P55201 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRPF1P55201 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.65■□□□□ 0.9
BRPF1P55201 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.65■□□□□ 0.9
BRPF1P55201 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRPF1P55201 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
BRPF1P55201 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRPF1P55201 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.64■□□□□ 0.9
BRPF1P55201 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRPF1P55201 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.64■□□□□ 0.9
BRPF1P55201 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRPF1P55201 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms