Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
ATP1B3P54709 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.2□□□□□ -0.14
ATP1B3P54709 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.2□□□□□ -0.14
ATP1B3P54709 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATP1B3P54709 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.19□□□□□ -0.14
ATP1B3P54709 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
ATP1B3P54709 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.19□□□□□ -0.14
ATP1B3P54709 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.19□□□□□ -0.14
ATP1B3P54709 UNC93B7-201ENST00000509439 705 ntBASIC14.19□□□□□ -0.14
ATP1B3P54709 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.19□□□□□ -0.14
ATP1B3P54709 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.19□□□□□ -0.14
ATP1B3P54709 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.19□□□□□ -0.14
ATP1B3P54709 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 TP73-AS1-207ENST00000624167 988 ntBASIC14.19□□□□□ -0.14
ATP1B3P54709 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.19□□□□□ -0.14
ATP1B3P54709 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.19□□□□□ -0.14
ATP1B3P54709 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ATP1B3P54709 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATP1B3P54709 AP002414.3-201ENST00000589352 1468 ntBASIC14.18□□□□□ -0.14
ATP1B3P54709 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ATP1B3P54709 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.18□□□□□ -0.14
ATP1B3P54709 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.18□□□□□ -0.14
ATP1B3P54709 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.18□□□□□ -0.14
ATP1B3P54709 AC018712.1-201ENST00000455767 687 ntBASIC14.18□□□□□ -0.14
ATP1B3P54709 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.18□□□□□ -0.14
ATP1B3P54709 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.18□□□□□ -0.14
ATP1B3P54709 AC004790.2-201ENST00000623588 572 ntBASIC14.18□□□□□ -0.14
ATP1B3P54709 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms