Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.89■□□□□ 0.45
PMS1P54277 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PMS1P54277 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 HAUS4P1-201ENST00000406739 1145 ntBASIC17.89■□□□□ 0.45
PMS1P54277 AC023274.1-201ENST00000418278 595 ntBASIC17.89■□□□□ 0.45
PMS1P54277 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 GPX1P2-201ENST00000429271 606 ntBASIC17.89■□□□□ 0.45
PMS1P54277 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.89■□□□□ 0.45
PMS1P54277 RNA5SP416-201ENST00000516838 111 ntBASIC17.89■□□□□ 0.45
PMS1P54277 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.89■□□□□ 0.45
PMS1P54277 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 FER1L4-210ENST00000615531 5998 ntBASIC17.89■□□□□ 0.45
PMS1P54277 AL596257.1-201ENST00000641463 2694 ntBASIC17.89■□□□□ 0.45
PMS1P54277 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.89■□□□□ 0.45
PMS1P54277 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.89■□□□□ 0.45
PMS1P54277 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.89■□□□□ 0.45
PMS1P54277 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.89■□□□□ 0.45
PMS1P54277 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PMS1P54277 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 AC073347.1-201ENST00000421633 2643 ntBASIC17.88■□□□□ 0.45
PMS1P54277 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
PMS1P54277 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.88■□□□□ 0.45
PMS1P54277 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.88■□□□□ 0.45
PMS1P54277 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.88■□□□□ 0.45
PMS1P54277 FAM197Y3-203ENST00000618346 717 ntBASIC17.88■□□□□ 0.45
PMS1P54277 AL161645.1-201ENST00000622716 1255 ntBASIC17.88■□□□□ 0.45
PMS1P54277 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 AC013268.4-201ENST00000637413 2228 ntBASIC17.88■□□□□ 0.45
PMS1P54277 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.88■□□□□ 0.45
PMS1P54277 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PMS1P54277 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.88■□□□□ 0.45
PMS1P54277 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.87■□□□□ 0.45
PMS1P54277 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PMS1P54277 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 AC002056.1-201ENST00000395613 760 ntBASIC17.87■□□□□ 0.45
PMS1P54277 AL591424.1-201ENST00000442569 1213 ntBASIC17.87■□□□□ 0.45
PMS1P54277 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.87■□□□□ 0.45
PMS1P54277 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.87■□□□□ 0.45
PMS1P54277 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.87■□□□□ 0.45
PMS1P54277 MIR4321-201ENST00000592276 80 ntBASIC17.87■□□□□ 0.45
PMS1P54277 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 AC091812.2-201ENST00000619081 385 ntBASIC17.87■□□□□ 0.45
PMS1P54277 PMS2P7-201ENST00000506558 1336 ntBASIC17.87■□□□□ 0.45
PMS1P54277 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PMS1P54277 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms