Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRNA4P43681 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRNA4P43681 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRNA4P43681 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.42■□□□□ 0.22
CHRNA4P43681 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.42■□□□□ 0.22
CHRNA4P43681 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHRNA4P43681 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRNA4P43681 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
CHRNA4P43681 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.42■□□□□ 0.22
CHRNA4P43681 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA4P43681 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 AL592309.1-201ENST00000443127 649 ntBASIC16.41■□□□□ 0.22
CHRNA4P43681 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRNA4P43681 LINC02447-202ENST00000501888 2146 ntBASIC16.41■□□□□ 0.22
CHRNA4P43681 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 MIR3687-2-201ENST00000577708 61 ntBASIC16.41■□□□□ 0.22
CHRNA4P43681 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.41■□□□□ 0.22
CHRNA4P43681 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 MIR3687-1-201ENST00000614492 61 ntBASIC16.41■□□□□ 0.22
CHRNA4P43681 SPTSSB-204ENST00000617024 1292 ntBASIC16.41■□□□□ 0.22
CHRNA4P43681 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA4P43681 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA4P43681 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA4P43681 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA4P43681 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA4P43681 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRNA4P43681 UXT-AS1-201ENST00000590504 1525 ntBASIC16.4■□□□□ 0.22
CHRNA4P43681 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNA4P43681 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA4P43681 AC069224.1-201ENST00000566372 1715 ntBASIC16.4■□□□□ 0.22
CHRNA4P43681 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA4P43681 MIR346-201ENST00000362234 95 ntBASIC16.4■□□□□ 0.22
CHRNA4P43681 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.4■□□□□ 0.22
CHRNA4P43681 AC004461.1-201ENST00000412461 403 ntBASIC16.4■□□□□ 0.22
CHRNA4P43681 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CHRNA4P43681 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNA4P43681 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRNA4P43681 AC098859.1-201ENST00000502915 1238 ntBASIC16.4■□□□□ 0.22
CHRNA4P43681 IGHV3-62-201ENST00000520057 340 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms