Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.39■□□□□ 0.85
COL15A1P39059 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.39■□□□□ 0.85
COL15A1P39059 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.38■□□□□ 0.85
COL15A1P39059 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.38■□□□□ 0.85
COL15A1P39059 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
COL15A1P39059 AL592424.1-201ENST00000563624 1536 ntBASIC20.38■□□□□ 0.85
COL15A1P39059 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.38■□□□□ 0.85
COL15A1P39059 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 AL162726.2-201ENST00000438986 1017 ntBASIC20.38■□□□□ 0.85
COL15A1P39059 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.38■□□□□ 0.85
COL15A1P39059 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.38■□□□□ 0.85
COL15A1P39059 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.38■□□□□ 0.85
COL15A1P39059 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
COL15A1P39059 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COL15A1P39059 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL15A1P39059 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.38■□□□□ 0.85
COL15A1P39059 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL15A1P39059 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
COL15A1P39059 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.37■□□□□ 0.85
COL15A1P39059 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 AC245100.5-201ENST00000452108 331 ntBASIC20.37■□□□□ 0.85
COL15A1P39059 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.37■□□□□ 0.85
COL15A1P39059 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.37■□□□□ 0.85
COL15A1P39059 NKILA-202ENST00000614771 2598 ntBASIC20.37■□□□□ 0.85
COL15A1P39059 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.37■□□□□ 0.85
COL15A1P39059 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL15A1P39059 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.37■□□□□ 0.85
COL15A1P39059 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL15A1P39059 PDIA3P1-201ENST00000471856 1510 ntBASIC20.37■□□□□ 0.85
COL15A1P39059 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
COL15A1P39059 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL15A1P39059 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.36■□□□□ 0.85
COL15A1P39059 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COL15A1P39059 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.36■□□□□ 0.85
COL15A1P39059 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.36■□□□□ 0.85
COL15A1P39059 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.36■□□□□ 0.85
COL15A1P39059 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.36■□□□□ 0.85
COL15A1P39059 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.36■□□□□ 0.85
COL15A1P39059 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COL15A1P39059 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.36■□□□□ 0.85
COL15A1P39059 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.36■□□□□ 0.85
COL15A1P39059 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL15A1P39059 AC074338.1-201ENST00000416825 156 ntBASIC20.35■□□□□ 0.85
COL15A1P39059 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.35■□□□□ 0.85
COL15A1P39059 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.35■□□□□ 0.85
COL15A1P39059 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms