Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RFC4P35249 AC074338.1-201ENST00000416825 156 ntBASIC20.23■□□□□ 0.83
RFC4P35249 TARDBPP1-201ENST00000442013 1203 ntBASIC20.23■□□□□ 0.83
RFC4P35249 FTH1P14-201ENST00000482930 551 ntBASIC20.23■□□□□ 0.83
RFC4P35249 RPL13AP25-201ENST00000484130 612 ntBASIC20.23■□□□□ 0.83
RFC4P35249 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.23■□□□□ 0.83
RFC4P35249 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 MIR3615-201ENST00000581999 87 ntBASIC20.23■□□□□ 0.83
RFC4P35249 AC243960.2-201ENST00000600996 747 ntBASIC20.23■□□□□ 0.83
RFC4P35249 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.23■□□□□ 0.83
RFC4P35249 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RFC4P35249 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RFC4P35249 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RFC4P35249 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RFC4P35249 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 BAATP1-201ENST00000412284 1225 ntBASIC20.22■□□□□ 0.83
RFC4P35249 GOLGA2P4-201ENST00000441462 777 ntBASIC20.22■□□□□ 0.83
RFC4P35249 EEF1DP4-201ENST00000446006 880 ntBASIC20.22■□□□□ 0.83
RFC4P35249 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RFC4P35249 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.22■□□□□ 0.83
RFC4P35249 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.22■□□□□ 0.83
RFC4P35249 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.22■□□□□ 0.83
RFC4P35249 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC4P35249 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFC4P35249 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC4P35249 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC4P35249 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RFC4P35249 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.21■□□□□ 0.83
RFC4P35249 AC004945.1-201ENST00000416738 983 ntBASIC20.21■□□□□ 0.83
RFC4P35249 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 AC016694.1-201ENST00000434179 700 ntBASIC20.21■□□□□ 0.83
RFC4P35249 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 AC079316.1-201ENST00000548397 411 ntBASIC20.21■□□□□ 0.83
RFC4P35249 AC243562.2-201ENST00000561247 970 ntBASIC20.21■□□□□ 0.83
RFC4P35249 AC009486.1-201ENST00000569860 813 ntBASIC20.21■□□□□ 0.83
RFC4P35249 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RFC4P35249 AL139099.5-201ENST00000635274 300 ntBASIC20.21■□□□□ 0.83
RFC4P35249 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RFC4P35249 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RFC4P35249 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.21■□□□□ 0.83
RFC4P35249 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC4P35249 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RFC4P35249 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RFC4P35249 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.2■□□□□ 0.82
RFC4P35249 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC4P35249 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC4P35249 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RFC4P35249 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC4P35249 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC4P35249 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC4P35249 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms