Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6P35125 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6P35125 AL450472.2-201ENST00000603663 1156 ntBASIC21.63■■□□□ 1.05
USP6P35125 AC005252.2-201ENST00000624630 1141 ntBASIC21.63■■□□□ 1.05
USP6P35125 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 MSTO2P-201ENST00000314835 1709 ntBASIC21.63■■□□□ 1.05
USP6P35125 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 AC092171.3-201ENST00000610122 2651 ntBASIC21.63■■□□□ 1.05
USP6P35125 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6P35125 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
USP6P35125 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 ENPP7P5-201ENST00000541031 1031 ntBASIC21.63■■□□□ 1.05
USP6P35125 AL583810.1-201ENST00000553344 1045 ntBASIC21.63■■□□□ 1.05
USP6P35125 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6P35125 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.62■■□□□ 1.05
USP6P35125 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.62■■□□□ 1.05
USP6P35125 MIR1908-201ENST00000410394 80 ntBASIC21.62■■□□□ 1.05
USP6P35125 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6P35125 AC245100.3-201ENST00000441281 285 ntBASIC21.62■■□□□ 1.05
USP6P35125 RPL13AP25-201ENST00000484130 612 ntBASIC21.62■■□□□ 1.05
USP6P35125 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6P35125 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6P35125 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6P35125 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6P35125 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
USP6P35125 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.61■■□□□ 1.05
USP6P35125 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
USP6P35125 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6P35125 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6P35125 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.61■■□□□ 1.05
USP6P35125 C1QBPP1-201ENST00000400117 770 ntBASIC21.61■■□□□ 1.05
USP6P35125 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6P35125 BCRP2-202ENST00000447763 634 ntBASIC21.61■■□□□ 1.05
USP6P35125 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.61■■□□□ 1.05
USP6P35125 AC106760.1-201ENST00000508690 800 ntBASIC21.61■■□□□ 1.05
USP6P35125 BCRP6-201ENST00000510112 632 ntBASIC21.61■■□□□ 1.05
USP6P35125 BCRP7-201ENST00000511549 544 ntBASIC21.61■■□□□ 1.05
USP6P35125 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6P35125 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.61■■□□□ 1.05
USP6P35125 PTP4A1P2-201ENST00000546033 454 ntBASIC21.61■■□□□ 1.05
USP6P35125 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.61■■□□□ 1.05
USP6P35125 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.61■■□□□ 1.05
USP6P35125 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6P35125 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.61■■□□□ 1.05
USP6P35125 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms