Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSP1P33241 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSP1P33241 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSP1P33241 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSP1P33241 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.39■□□□□ 0.21
LSP1P33241 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LSP1P33241 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSP1P33241 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LSP1P33241 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
LSP1P33241 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 AC015656.1-201ENST00000624209 3578 ntBASIC16.38■□□□□ 0.21
LSP1P33241 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSP1P33241 LIN28AP1-201ENST00000429574 405 ntBASIC16.38■□□□□ 0.21
LSP1P33241 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 MPDU1-223ENST00000582151 728 ntBASIC16.38■□□□□ 0.21
LSP1P33241 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 AC145285.6-201ENST00000604632 637 ntBASIC16.38■□□□□ 0.21
LSP1P33241 AC010947.1-201ENST00000623454 693 ntBASIC16.38■□□□□ 0.21
LSP1P33241 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSP1P33241 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 AC117489.1-201ENST00000625169 3217 ntBASIC16.38■□□□□ 0.21
LSP1P33241 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.38■□□□□ 0.21
LSP1P33241 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LSP1P33241 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSP1P33241 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSP1P33241 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 Z83836.1-201ENST00000624605 1642 ntBASIC16.37■□□□□ 0.21
LSP1P33241 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.37■□□□□ 0.21
LSP1P33241 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 ATP5G1P1-201ENST00000448724 379 ntBASIC16.37■□□□□ 0.21
LSP1P33241 SIGLEC30P-201ENST00000455569 941 ntBASIC16.37■□□□□ 0.21
LSP1P33241 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.37■□□□□ 0.21
LSP1P33241 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 AC004817.3-201ENST00000602957 2129 ntBASIC16.37■□□□□ 0.21
LSP1P33241 AC079781.5-202ENST00000641784 3743 ntBASIC16.37■□□□□ 0.21
LSP1P33241 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSP1P33241 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSP1P33241 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
LSP1P33241 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.36■□□□□ 0.21
LSP1P33241 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.36■□□□□ 0.21
LSP1P33241 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms