Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 MTHFR-217ENST00000641820 1569 ntBASIC14.97□□□□□ -0.01
SHC1P29353 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 DBET-201ENST00000630918 3363 ntBASIC14.97□□□□□ -0.01
SHC1P29353 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 AL355306.1-201ENST00000415580 579 ntBASIC14.96□□□□□ -0.01
SHC1P29353 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.96□□□□□ -0.01
SHC1P29353 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 ADH5P3-201ENST00000433842 1137 ntBASIC14.96□□□□□ -0.01
SHC1P29353 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.96□□□□□ -0.01
SHC1P29353 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.96□□□□□ -0.01
SHC1P29353 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.96□□□□□ -0.01
SHC1P29353 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SHC1P29353 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 AC005829.1-201ENST00000570002 483 ntBASIC14.96□□□□□ -0.01
SHC1P29353 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 MIR4469-201ENST00000583919 79 ntBASIC14.96□□□□□ -0.01
SHC1P29353 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.96□□□□□ -0.01
SHC1P29353 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.96□□□□□ -0.01
SHC1P29353 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.96□□□□□ -0.01
SHC1P29353 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SHC1P29353 ME2P1-201ENST00000426028 1970 ntBASIC14.96□□□□□ -0.01
SHC1P29353 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHC1P29353 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
SHC1P29353 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
SHC1P29353 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SHC1P29353 AC092850.2-201ENST00000623821 2697 ntBASIC14.96□□□□□ -0.02
SHC1P29353 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SHC1P29353 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SHC1P29353 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
SHC1P29353 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHC1P29353 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.95□□□□□ -0.02
SHC1P29353 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms