Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN6P29350 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN6P29350 AC073347.1-201ENST00000421633 2643 ntBASIC15.46■□□□□ 0.07
PTPN6P29350 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN6P29350 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PTPN6P29350 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.46■□□□□ 0.07
PTPN6P29350 AC002347.1-201ENST00000569543 541 ntBASIC15.46■□□□□ 0.07
PTPN6P29350 AC021097.1-201ENST00000607902 574 ntBASIC15.46■□□□□ 0.07
PTPN6P29350 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTPN6P29350 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN6P29350 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN6P29350 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN6P29350 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN6P29350 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN6P29350 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PTPN6P29350 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PTPN6P29350 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN6P29350 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 AC004832.2-201ENST00000426397 482 ntBASIC15.45■□□□□ 0.06
PTPN6P29350 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 AC092865.5-201ENST00000545435 363 ntBASIC15.45■□□□□ 0.06
PTPN6P29350 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.45■□□□□ 0.06
PTPN6P29350 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN6P29350 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 AL031055.1-201ENST00000606362 631 ntBASIC15.45■□□□□ 0.06
PTPN6P29350 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 U82695.1-201ENST00000635752 1889 ntBASIC15.45■□□□□ 0.06
PTPN6P29350 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN6P29350 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN6P29350 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN6P29350 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PTPN6P29350 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTPN6P29350 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PTPN6P29350 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 PRAL-201ENST00000624952 3286 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN6P29350 YBX2P1-201ENST00000394192 760 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 KRT18P13-201ENST00000400056 1290 ntBASIC15.44■□□□□ 0.06
PTPN6P29350 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.44■□□□□ 0.06
PTPN6P29350 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.44■□□□□ 0.06
PTPN6P29350 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PTPN6P29350 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN6P29350 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.44■□□□□ 0.06
PTPN6P29350 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms