Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC061975.2-201ENST00000581722 295 ntBASIC14.75□□□□□ -0.05
GDF1P27539 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
GDF1P27539 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.75□□□□□ -0.05
GDF1P27539 AJ011932.1-201ENST00000621707 465 ntBASIC14.75□□□□□ -0.05
GDF1P27539 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.75□□□□□ -0.05
GDF1P27539 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.75□□□□□ -0.05
GDF1P27539 AC005052.1-201ENST00000625181 2492 ntBASIC14.75□□□□□ -0.05
GDF1P27539 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 AGGF1P2-201ENST00000426656 2106 ntBASIC14.75□□□□□ -0.05
GDF1P27539 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.75□□□□□ -0.05
GDF1P27539 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GDF1P27539 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
GDF1P27539 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDF1P27539 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
GDF1P27539 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GDF1P27539 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.74□□□□□ -0.05
GDF1P27539 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
GDF1P27539 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.74□□□□□ -0.05
GDF1P27539 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.74□□□□□ -0.05
GDF1P27539 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.74□□□□□ -0.05
GDF1P27539 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.74□□□□□ -0.05
GDF1P27539 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.74□□□□□ -0.05
GDF1P27539 AL138828.2-201ENST00000615812 383 ntBASIC14.74□□□□□ -0.05
GDF1P27539 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.74□□□□□ -0.05
GDF1P27539 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GDF1P27539 AC100757.3-201ENST00000622361 1406 ntBASIC14.74□□□□□ -0.05
GDF1P27539 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GDF1P27539 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.74□□□□□ -0.05
GDF1P27539 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GDF1P27539 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 PCDHA12-202ENST00000613593 2588 ntBASIC14.73□□□□□ -0.05
GDF1P27539 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.73□□□□□ -0.05
GDF1P27539 HLA-V-204ENST00000476601 1289 ntBASIC14.73□□□□□ -0.05
GDF1P27539 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.73□□□□□ -0.05
GDF1P27539 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GDF1P27539 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.73□□□□□ -0.05
GDF1P27539 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GDF1P27539 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GDF1P27539 NKILA-202ENST00000614771 2598 ntBASIC14.73□□□□□ -0.05
GDF1P27539 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms