Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14□□□□□ -0.17
CD40P25942 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.99□□□□□ -0.17
CD40P25942 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.99□□□□□ -0.17
CD40P25942 AL035633.1-201ENST00000406139 838 ntBASIC13.99□□□□□ -0.17
CD40P25942 AC009477.1-201ENST00000452936 217 ntBASIC13.99□□□□□ -0.17
CD40P25942 SERBP1P3-201ENST00000459980 809 ntBASIC13.99□□□□□ -0.17
CD40P25942 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.99□□□□□ -0.17
CD40P25942 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.99□□□□□ -0.17
CD40P25942 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.99□□□□□ -0.17
CD40P25942 AL844908.2-201ENST00000609461 460 ntBASIC13.99□□□□□ -0.17
CD40P25942 AC009118.2-201ENST00000613275 655 ntBASIC13.99□□□□□ -0.17
CD40P25942 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CD40P25942 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.99□□□□□ -0.17
CD40P25942 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.99□□□□□ -0.17
CD40P25942 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD40P25942 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD40P25942 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
CD40P25942 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.99□□□□□ -0.17
CD40P25942 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD40P25942 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 KRT8P12-202ENST00000472924 1397 ntBASIC13.98□□□□□ -0.17
CD40P25942 ME2P1-201ENST00000426028 1970 ntBASIC13.98□□□□□ -0.17
CD40P25942 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 ALOX12P2-203ENST00000570921 1945 ntBASIC13.98□□□□□ -0.17
CD40P25942 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.98□□□□□ -0.17
CD40P25942 SPDYE17-201ENST00000412399 783 ntBASIC13.98□□□□□ -0.17
CD40P25942 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.98□□□□□ -0.17
CD40P25942 RN7SL618P-201ENST00000477850 296 ntBASIC13.98□□□□□ -0.17
CD40P25942 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.98□□□□□ -0.17
CD40P25942 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.98□□□□□ -0.17
CD40P25942 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.98□□□□□ -0.17
CD40P25942 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.98□□□□□ -0.17
CD40P25942 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CD40P25942 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.98□□□□□ -0.17
CD40P25942 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.98□□□□□ -0.17
CD40P25942 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.98□□□□□ -0.17
CD40P25942 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms