Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.28■□□□□ 0.04
CHMP24386 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP24386 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP24386 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 AL513190.1-201ENST00000621254 727 ntBASIC15.28■□□□□ 0.04
CHMP24386 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.28■□□□□ 0.04
CHMP24386 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 AL353732.1-201ENST00000569618 1459 ntBASIC15.27■□□□□ 0.04
CHMP24386 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CHMP24386 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.27■□□□□ 0.04
CHMP24386 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CHMP24386 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.27■□□□□ 0.04
CHMP24386 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.27■□□□□ 0.04
CHMP24386 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CHMP24386 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 AC091167.2-201ENST00000579581 588 ntBASIC15.27■□□□□ 0.04
CHMP24386 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.27■□□□□ 0.04
CHMP24386 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.27■□□□□ 0.04
CHMP24386 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CHMP24386 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP24386 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CHMP24386 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP24386 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.27■□□□□ 0.03
CHMP24386 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP24386 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CHMP24386 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP24386 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.27■□□□□ 0.03
CHMP24386 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.27■□□□□ 0.03
CHMP24386 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP24386 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP24386 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP24386 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 AL512652.2-201ENST00000625156 1716 ntBASIC15.26■□□□□ 0.03
CHMP24386 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CHMP24386 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP24386 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms