Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL1P22362 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL1P22362 AP002472.1-201ENST00000577490 586 ntBASIC13.99□□□□□ -0.17
CCL1P22362 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL1P22362 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL1P22362 PRAL-201ENST00000624952 3286 ntBASIC13.99□□□□□ -0.17
CCL1P22362 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 PPT1-215ENST00000641471 2368 ntBASIC13.98□□□□□ -0.17
CCL1P22362 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL1P22362 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 AC013268.4-201ENST00000637413 2228 ntBASIC13.98□□□□□ -0.17
CCL1P22362 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 TPM4P1-201ENST00000436100 807 ntBASIC13.98□□□□□ -0.17
CCL1P22362 AC074386.1-202ENST00000463561 864 ntBASIC13.98□□□□□ -0.17
CCL1P22362 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.98□□□□□ -0.17
CCL1P22362 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCL1P22362 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
CCL1P22362 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL1P22362 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL1P22362 AL596257.1-201ENST00000641463 2694 ntBASIC13.98□□□□□ -0.17
CCL1P22362 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 AC073347.1-201ENST00000421633 2643 ntBASIC13.97□□□□□ -0.17
CCL1P22362 AC103702.1-201ENST00000548801 2630 ntBASIC13.97□□□□□ -0.17
CCL1P22362 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL1P22362 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 SSR4P1-203ENST00000599569 2260 ntBASIC13.97□□□□□ -0.17
CCL1P22362 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL1P22362 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL1P22362 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 AC098859.1-201ENST00000502915 1238 ntBASIC13.97□□□□□ -0.17
CCL1P22362 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL1P22362 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL1P22362 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms