Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC026396.1-201ENST00000419388 421 ntBASIC12.55□□□□□ -0.4
RAB4AP20338 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB4AP20338 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB4AP20338 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 AC024563.2-201ENST00000603282 481 ntBASIC12.55□□□□□ -0.4
RAB4AP20338 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 STRCP1-201ENST00000509801 5328 ntBASIC12.55□□□□□ -0.4
RAB4AP20338 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
RAB4AP20338 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB4AP20338 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB4AP20338 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB4AP20338 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB4AP20338 DGCR9-201ENST00000609630 2415 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 COL6A4P2-202ENST00000504443 2753 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
RAB4AP20338 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB4AP20338 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RAB4AP20338 KRT18P6-201ENST00000555540 1265 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 AC010653.2-201ENST00000623505 997 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 AL157888.1-201ENST00000631930 593 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 HLA-A-202ENST00000376806 1854 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB4AP20338 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 AC006449.6-201ENST00000612330 2296 ntBASIC12.54□□□□□ -0.4
RAB4AP20338 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB4AP20338 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB4AP20338 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB4AP20338 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
RAB4AP20338 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms