Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 AC073347.1-201ENST00000421633 2643 ntBASIC19.48■□□□□ 0.71
NCLP19338 AC243591.1-201ENST00000452967 1364 ntBASIC19.48■□□□□ 0.71
NCLP19338 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NCLP19338 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.48■□□□□ 0.71
NCLP19338 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.48■□□□□ 0.71
NCLP19338 AP002414.1-201ENST00000391405 1147 ntBASIC19.48■□□□□ 0.71
NCLP19338 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.48■□□□□ 0.71
NCLP19338 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.48■□□□□ 0.71
NCLP19338 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.48■□□□□ 0.71
NCLP19338 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.48■□□□□ 0.71
NCLP19338 AC008608.2-201ENST00000606089 416 ntBASIC19.48■□□□□ 0.71
NCLP19338 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.48■□□□□ 0.71
NCLP19338 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
NCLP19338 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
NCLP19338 KRT8P49-201ENST00000604166 1432 ntBASIC19.48■□□□□ 0.71
NCLP19338 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC19.48■□□□□ 0.71
NCLP19338 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.48■□□□□ 0.71
NCLP19338 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCLP19338 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NCLP19338 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.47■□□□□ 0.71
NCLP19338 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.47■□□□□ 0.71
NCLP19338 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
NCLP19338 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.47■□□□□ 0.71
NCLP19338 AL603832.2-201ENST00000566195 2125 ntBASIC19.47■□□□□ 0.71
NCLP19338 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 AC064862.7-201ENST00000604520 867 ntBASIC19.47■□□□□ 0.71
NCLP19338 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.47■□□□□ 0.71
NCLP19338 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.47■□□□□ 0.71
NCLP19338 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.47■□□□□ 0.71
NCLP19338 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.47■□□□□ 0.71
NCLP19338 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 HLA-A-201ENST00000376802 1334 ntBASIC19.47■□□□□ 0.71
NCLP19338 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCLP19338 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC19.47■□□□□ 0.71
NCLP19338 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC19.46■□□□□ 0.71
NCLP19338 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.46■□□□□ 0.71
NCLP19338 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 RBM17P3-201ENST00000417687 1192 ntBASIC19.46■□□□□ 0.71
NCLP19338 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms