Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NELFEP18615 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 AL671277.1-201ENST00000429656 993 ntBASIC16.16■□□□□ 0.18
NELFEP18615 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 AC091167.2-201ENST00000579581 588 ntBASIC16.16■□□□□ 0.18
NELFEP18615 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFEP18615 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFEP18615 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFEP18615 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFEP18615 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NELFEP18615 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NELFEP18615 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.15■□□□□ 0.18
NELFEP18615 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.15■□□□□ 0.18
NELFEP18615 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.15■□□□□ 0.18
NELFEP18615 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.15■□□□□ 0.18
NELFEP18615 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.15■□□□□ 0.18
NELFEP18615 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 AL355385.1-201ENST00000606123 409 ntBASIC16.15■□□□□ 0.18
NELFEP18615 AC026120.1-201ENST00000611536 926 ntBASIC16.15■□□□□ 0.18
NELFEP18615 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NELFEP18615 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.15■□□□□ 0.18
NELFEP18615 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NELFEP18615 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.18
NELFEP18615 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NELFEP18615 FRMD8P1-201ENST00000440433 1524 ntBASIC16.14■□□□□ 0.18
NELFEP18615 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.14■□□□□ 0.18
NELFEP18615 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NELFEP18615 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
NELFEP18615 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NELFEP18615 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NELFEP18615 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
NELFEP18615 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.14■□□□□ 0.17
NELFEP18615 DUX4L17-201ENST00000557360 1267 ntBASIC16.14■□□□□ 0.17
NELFEP18615 AL161645.1-201ENST00000622716 1255 ntBASIC16.14■□□□□ 0.17
NELFEP18615 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NELFEP18615 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NELFEP18615 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.14■□□□□ 0.17
NELFEP18615 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NELFEP18615 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms