Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC126177.1-201ENST00000547829 2218 ntBASIC15.15■□□□□ 0.02
PRKCAP17252 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 POLD2P1-201ENST00000511220 997 ntBASIC15.15■□□□□ 0.02
PRKCAP17252 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
PRKCAP17252 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.15■□□□□ 0.02
PRKCAP17252 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 PDPK2P-202ENST00000562415 1191 ntBASIC15.15■□□□□ 0.02
PRKCAP17252 AL513190.1-201ENST00000621254 727 ntBASIC15.15■□□□□ 0.02
PRKCAP17252 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.15■□□□□ 0.02
PRKCAP17252 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PRKCAP17252 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRKCAP17252 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.14■□□□□ 0.01
PRKCAP17252 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PRKCAP17252 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.14■□□□□ 0.01
PRKCAP17252 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.14■□□□□ 0.01
PRKCAP17252 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.14■□□□□ 0.01
PRKCAP17252 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 MIR3909-201ENST00000579518 119 ntBASIC15.14■□□□□ 0.01
PRKCAP17252 AL031055.1-201ENST00000606362 631 ntBASIC15.14■□□□□ 0.01
PRKCAP17252 AC092865.6-201ENST00000642101 219 ntBASIC15.14■□□□□ 0.01
PRKCAP17252 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
PRKCAP17252 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
PRKCAP17252 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PRKCAP17252 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PRKCAP17252 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRKCAP17252 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.13■□□□□ 0.01
PRKCAP17252 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.13■□□□□ 0.01
PRKCAP17252 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PRKCAP17252 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 CYP2T1P-202ENST00000641596 2535 ntBASIC15.13■□□□□ 0.01
PRKCAP17252 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.13■□□□□ 0.01
PRKCAP17252 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
PRKCAP17252 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.13■□□□□ 0.01
PRKCAP17252 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
PRKCAP17252 AL009178.2-201ENST00000597278 2719 ntBASIC15.13■□□□□ 0.01
PRKCAP17252 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.13■□□□□ 0.01
PRKCAP17252 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRKCAP17252 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRKCAP17252 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PRKCAP17252 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.13■□□□□ 0.01
PRKCAP17252 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRKCAP17252 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.13■□□□□ 0.01
PRKCAP17252 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms