Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC132938.4-201ENST00000623835 848 ntBASIC27.24■■□□□ 1.95
CFTRP13569 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFTRP13569 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CFTRP13569 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CFTRP13569 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.23■■□□□ 1.95
CFTRP13569 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC27.23■■□□□ 1.95
CFTRP13569 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 ACTBP8-201ENST00000403258 1108 ntBASIC27.23■■□□□ 1.95
CFTRP13569 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC27.23■■□□□ 1.95
CFTRP13569 TMEM198B-204ENST00000484016 896 ntBASIC27.23■■□□□ 1.95
CFTRP13569 IMP3P2-201ENST00000489760 475 ntBASIC27.23■■□□□ 1.95
CFTRP13569 RNA5SP486-201ENST00000515961 83 ntBASIC27.23■■□□□ 1.95
CFTRP13569 AC097724.1-201ENST00000609581 426 ntBASIC27.23■■□□□ 1.95
CFTRP13569 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC27.23■■□□□ 1.95
CFTRP13569 REXO1L1P-202ENST00000608646 1974 ntBASIC27.23■■□□□ 1.95
CFTRP13569 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CFTRP13569 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 PCDHB18P-201ENST00000524813 2368 ntBASIC27.22■■□□□ 1.95
CFTRP13569 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC27.22■■□□□ 1.95
CFTRP13569 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
CFTRP13569 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
CFTRP13569 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 POM121L10P-201ENST00000436994 1285 ntBASIC27.22■■□□□ 1.95
CFTRP13569 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 RPS2P36-201ENST00000456516 831 ntBASIC27.22■■□□□ 1.95
CFTRP13569 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC27.22■■□□□ 1.95
CFTRP13569 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC27.22■■□□□ 1.95
CFTRP13569 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
CFTRP13569 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CFTRP13569 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
CFTRP13569 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFTRP13569 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 NOC2LP2-201ENST00000407594 1944 ntBASIC27.21■■□□□ 1.95
CFTRP13569 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC27.21■■□□□ 1.95
CFTRP13569 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC27.21■■□□□ 1.95
CFTRP13569 DEF8-202ENST00000418391 852 ntTSL 2 BASIC27.21■■□□□ 1.95
CFTRP13569 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
CFTRP13569 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC27.21■■□□□ 1.95
CFTRP13569 RN7SL769P-201ENST00000469386 295 ntBASIC27.21■■□□□ 1.95
CFTRP13569 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC27.21■■□□□ 1.95
CFTRP13569 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CFTRP13569 AL451050.2-201ENST00000606967 682 ntBASIC27.21■■□□□ 1.95
CFTRP13569 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC27.21■■□□□ 1.95
CFTRP13569 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC27.21■■□□□ 1.95
CFTRP13569 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC27.21■■□□□ 1.95
CFTRP13569 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFTRP13569 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CFTRP13569 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CFTRP13569 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CFTRP13569 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC27.2■■□□□ 1.95
CFTRP13569 AC016700.1-201ENST00000429424 312 ntBASIC27.2■■□□□ 1.95
CFTRP13569 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC27.2■■□□□ 1.95
CFTRP13569 MPRIPP1-201ENST00000452433 1089 ntBASIC27.2■■□□□ 1.95
CFTRP13569 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC27.2■■□□□ 1.95
CFTRP13569 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC27.2■■□□□ 1.95
CFTRP13569 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC27.2■■□□□ 1.94
CFTRP13569 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CFTRP13569 KRT8P35-201ENST00000483942 1338 ntBASIC27.2■■□□□ 1.94
CFTRP13569 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
CFTRP13569 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CFTRP13569 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
CFTRP13569 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CFTRP13569 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CFTRP13569 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CFTRP13569 MIR33B-201ENST00000385104 96 ntBASIC27.19■■□□□ 1.94
CFTRP13569 AL133267.1-201ENST00000398220 340 ntBASIC27.19■■□□□ 1.94
CFTRP13569 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC27.19■■□□□ 1.94
CFTRP13569 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC27.19■■□□□ 1.94
CFTRP13569 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC27.19■■□□□ 1.94
CFTRP13569 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC27.19■■□□□ 1.94
CFTRP13569 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC27.19■■□□□ 1.94
CFTRP13569 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC27.19■■□□□ 1.94
CFTRP13569 NDUFV2P1-201ENST00000596415 907 ntBASIC27.19■■□□□ 1.94
CFTRP13569 SPCS2P2-201ENST00000603270 608 ntBASIC27.19■■□□□ 1.94
CFTRP13569 AC128714.1-201ENST00000637035 887 ntBASIC27.19■■□□□ 1.94
CFTRP13569 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CFTRP13569 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CFTRP13569 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms