Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPRFP10586 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPRFP10586 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPRFP10586 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPRFP10586 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPRFP10586 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPRFP10586 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPRFP10586 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPRFP10586 AL133267.1-201ENST00000398220 340 ntBASIC18.33■□□□□ 0.53
PTPRFP10586 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPRFP10586 AC026954.1-201ENST00000429771 1293 ntBASIC18.33■□□□□ 0.53
PTPRFP10586 AC016694.1-201ENST00000434179 700 ntBASIC18.33■□□□□ 0.53
PTPRFP10586 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPRFP10586 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.33■□□□□ 0.53
PTPRFP10586 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPRFP10586 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.33■□□□□ 0.53
PTPRFP10586 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.33■□□□□ 0.53
PTPRFP10586 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPRFP10586 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PTPRFP10586 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPRFP10586 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPRFP10586 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PTPRFP10586 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPRFP10586 AC005052.1-201ENST00000625181 2492 ntBASIC18.33■□□□□ 0.52
PTPRFP10586 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPRFP10586 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPRFP10586 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PTPRFP10586 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 RNU1-114P-201ENST00000365297 166 ntBASIC18.33■□□□□ 0.52
PTPRFP10586 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPRFP10586 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPRFP10586 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPRFP10586 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPRFP10586 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPRFP10586 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PTPRFP10586 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPRFP10586 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPRFP10586 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTPRFP10586 DRD5P1-201ENST00000456605 1438 ntBASIC18.32■□□□□ 0.52
PTPRFP10586 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPRFP10586 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
PTPRFP10586 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.32■□□□□ 0.52
PTPRFP10586 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 AC004945.1-201ENST00000416738 983 ntBASIC18.32■□□□□ 0.52
PTPRFP10586 AC006033.1-201ENST00000440505 426 ntBASIC18.32■□□□□ 0.52
PTPRFP10586 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPRFP10586 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPRFP10586 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTPRFP10586 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PTPRFP10586 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPRFP10586 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPRFP10586 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPRFP10586 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPRFP10586 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.31■□□□□ 0.52
PTPRFP10586 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTPRFP10586 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPRFP10586 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PTPRFP10586 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PTPRFP10586 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PTPRFP10586 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPRFP10586 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPRFP10586 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms