Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15□□□□□ -0.01
THBS1P07996 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
THBS1P07996 UPF3AP3-201ENST00000420996 769 ntBASIC15□□□□□ -0.01
THBS1P07996 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15□□□□□ -0.01
THBS1P07996 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
THBS1P07996 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 AC112191.1-201ENST00000523689 701 ntBASIC15□□□□□ -0.01
THBS1P07996 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 MIR4321-201ENST00000592276 80 ntBASIC15□□□□□ -0.01
THBS1P07996 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15□□□□□ -0.01
THBS1P07996 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 HLA-DQB2-231ENST00000435145 2026 ntBASIC15□□□□□ -0.01
THBS1P07996 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 CICP6-201ENST00000457191 2729 ntBASIC15□□□□□ -0.01
THBS1P07996 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
THBS1P07996 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
THBS1P07996 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.99□□□□□ -0.01
THBS1P07996 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.99□□□□□ -0.01
THBS1P07996 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.99□□□□□ -0.01
THBS1P07996 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 RPSAP43-201ENST00000402237 625 ntBASIC14.99□□□□□ -0.01
THBS1P07996 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.99□□□□□ -0.01
THBS1P07996 KRT18P3-201ENST00000451602 1288 ntBASIC14.99□□□□□ -0.01
THBS1P07996 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.99□□□□□ -0.01
THBS1P07996 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.99□□□□□ -0.01
THBS1P07996 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.99□□□□□ -0.01
THBS1P07996 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 AC055717.3-201ENST00000622967 595 ntBASIC14.99□□□□□ -0.01
THBS1P07996 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.99□□□□□ -0.01
THBS1P07996 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
THBS1P07996 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THBS1P07996 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
THBS1P07996 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.98□□□□□ -0.01
THBS1P07996 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.98□□□□□ -0.01
THBS1P07996 GPX1P2-201ENST00000429271 606 ntBASIC14.98□□□□□ -0.01
THBS1P07996 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.98□□□□□ -0.01
THBS1P07996 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
THBS1P07996 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
THBS1P07996 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.98□□□□□ -0.01
THBS1P07996 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms