Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 AC005593.1-201ENST00000624894 515 ntBASIC15.26■□□□□ 0.03
OPN1SWP03999 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.26■□□□□ 0.03
OPN1SWP03999 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPN1SWP03999 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
OPN1SWP03999 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 AC013268.4-201ENST00000637413 2228 ntBASIC15.25■□□□□ 0.03
OPN1SWP03999 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
OPN1SWP03999 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
OPN1SWP03999 FAM197Y8-203ENST00000450145 560 ntBASIC15.25■□□□□ 0.03
OPN1SWP03999 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.25■□□□□ 0.03
OPN1SWP03999 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.25■□□□□ 0.03
OPN1SWP03999 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.25■□□□□ 0.03
OPN1SWP03999 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
OPN1SWP03999 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.25■□□□□ 0.03
OPN1SWP03999 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 RNU1-129P-201ENST00000384064 167 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 AC018712.1-201ENST00000455767 687 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 EMBP1-201ENST00000458200 901 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 U1.21-201ENST00000580816 167 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.24■□□□□ 0.03
OPN1SWP03999 AL031055.1-201ENST00000606362 631 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 AC148477.8-201ENST00000624298 468 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 AC117500.6-201ENST00000624871 588 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.24■□□□□ 0.03
OPN1SWP03999 AC067930.6-201ENST00000623257 4947 ntBASIC15.24■□□□□ 0.03
OPN1SWP03999 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
OPN1SWP03999 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
OPN1SWP03999 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms