Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CLN5O75503 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CLN5O75503 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CLN5O75503 RCN1P2-201ENST00000398357 915 ntBASIC13.39□□□□□ -0.27
CLN5O75503 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CLN5O75503 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CLN5O75503 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CLN5O75503 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.39□□□□□ -0.27
CLN5O75503 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.39□□□□□ -0.27
CLN5O75503 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.39□□□□□ -0.27
CLN5O75503 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLN5O75503 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CLN5O75503 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 ACTG1P4-201ENST00000425123 1122 ntBASIC13.38□□□□□ -0.27
CLN5O75503 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 FAM210CP-201ENST00000445714 574 ntBASIC13.38□□□□□ -0.27
CLN5O75503 AC104819.1-201ENST00000504587 486 ntBASIC13.38□□□□□ -0.27
CLN5O75503 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.38□□□□□ -0.27
CLN5O75503 AC074051.2-201ENST00000565115 352 ntBASIC13.38□□□□□ -0.27
CLN5O75503 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.38□□□□□ -0.27
CLN5O75503 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.38□□□□□ -0.27
CLN5O75503 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 AC007191.1-201ENST00000623179 2995 ntBASIC13.38□□□□□ -0.27
CLN5O75503 AP000867.4-201ENST00000641616 219 ntBASIC13.38□□□□□ -0.27
CLN5O75503 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 AC107918.4-201ENST00000641966 3141 ntBASIC13.38□□□□□ -0.27
CLN5O75503 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 CICP20-201ENST00000443330 2801 ntBASIC13.38□□□□□ -0.27
CLN5O75503 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CLN5O75503 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLN5O75503 OR2I1P-209ENST00000641730 5365 ntBASIC13.38□□□□□ -0.27
CLN5O75503 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLN5O75503 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms