Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.46■□□□□ 0.22
PRAMEF11O60813 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
PRAMEF11O60813 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF11O60813 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.46■□□□□ 0.22
PRAMEF11O60813 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 AL136982.4-201ENST00000437689 1740 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 FAM86GP-201ENST00000448322 971 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 KLF2P3-201ENST00000451977 1087 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 RN7SL828P-201ENST00000607615 303 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 AL133215.2-201ENST00000609242 977 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 AP001282.1-201ENST00000531301 1499 ntBASIC16.45■□□□□ 0.22
PRAMEF11O60813 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF11O60813 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF11O60813 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 AC125807.1-201ENST00000483097 614 ntBASIC16.44■□□□□ 0.22
PRAMEF11O60813 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 AC243562.2-201ENST00000561247 970 ntBASIC16.44■□□□□ 0.22
PRAMEF11O60813 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 AC069224.1-201ENST00000566372 1715 ntBASIC16.44■□□□□ 0.22
PRAMEF11O60813 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF11O60813 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF11O60813 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 CYP4F24P-201ENST00000586049 1580 ntBASIC16.43■□□□□ 0.22
PRAMEF11O60813 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms