Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LDB2O43679 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.25■□□□□ 0.19
LDB2O43679 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDB2O43679 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.25■□□□□ 0.19
LDB2O43679 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 AC004461.1-201ENST00000412461 403 ntBASIC16.25■□□□□ 0.19
LDB2O43679 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 SLC25A39P2-201ENST00000537614 270 ntBASIC16.25■□□□□ 0.19
LDB2O43679 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LDB2O43679 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB2O43679 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LDB2O43679 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB2O43679 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 UXT-AS1-201ENST00000590504 1525 ntBASIC16.24■□□□□ 0.19
LDB2O43679 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.24■□□□□ 0.19
LDB2O43679 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LDB2O43679 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
LDB2O43679 AC093520.2-201ENST00000561830 333 ntBASIC16.24■□□□□ 0.19
LDB2O43679 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.24■□□□□ 0.19
LDB2O43679 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 AC024267.1-201ENST00000582320 895 ntBASIC16.24■□□□□ 0.19
LDB2O43679 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB2O43679 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB2O43679 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LDB2O43679 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB2O43679 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB2O43679 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.23■□□□□ 0.19
LDB2O43679 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.23■□□□□ 0.19
LDB2O43679 AC092183.1-201ENST00000469884 875 ntBASIC16.23■□□□□ 0.19
LDB2O43679 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LDB2O43679 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.23■□□□□ 0.19
LDB2O43679 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB2O43679 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB2O43679 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.23■□□□□ 0.19
LDB2O43679 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.23■□□□□ 0.19
LDB2O43679 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB2O43679 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms