Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ2O43526 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ2O43526 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ2O43526 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ2O43526 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ2O43526 AL008638.5-201ENST00000623814 1298 ntBASIC20.64■□□□□ 0.89
KCNQ2O43526 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ2O43526 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ2O43526 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ2O43526 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ2O43526 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ2O43526 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ2O43526 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ2O43526 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ2O43526 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ2O43526 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNQ2O43526 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
KCNQ2O43526 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 AL591846.1-201ENST00000451736 433 ntBASIC20.63■□□□□ 0.89
KCNQ2O43526 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCNQ2O43526 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ2O43526 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ2O43526 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ2O43526 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ2O43526 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ2O43526 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KCNQ2O43526 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 AC138028.6-201ENST00000616106 1482 ntBASIC20.62■□□□□ 0.89
KCNQ2O43526 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ2O43526 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ2O43526 RN7SL769P-201ENST00000469386 295 ntBASIC20.62■□□□□ 0.89
KCNQ2O43526 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.62■□□□□ 0.89
KCNQ2O43526 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
KCNQ2O43526 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ2O43526 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ2O43526 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ2O43526 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.61■□□□□ 0.89
KCNQ2O43526 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KCNQ2O43526 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ2O43526 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 BNIP3P1-202ENST00000550043 1585 ntBASIC20.61■□□□□ 0.89
KCNQ2O43526 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KCNQ2O43526 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNQ2O43526 SCARNA20.5-201ENST00000516991 142 ntBASIC20.61■□□□□ 0.89
KCNQ2O43526 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ2O43526 MIR4741-201ENST00000579822 90 ntBASIC20.61■□□□□ 0.89
KCNQ2O43526 AC005695.3-201ENST00000614522 232 ntBASIC20.61■□□□□ 0.89
KCNQ2O43526 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ2O43526 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNQ2O43526 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ2O43526 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KCNQ2O43526 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
KCNQ2O43526 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ2O43526 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 AC060834.1-201ENST00000443027 2032 ntBASIC20.6■□□□□ 0.89
KCNQ2O43526 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ2O43526 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNQ2O43526 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms