Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.25■□□□□ 0.19
PHGDHO43175 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 U82695.1-201ENST00000635752 1889 ntBASIC16.25■□□□□ 0.19
PHGDHO43175 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 AC063926.3-201ENST00000624734 5658 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 DBET-201ENST00000630918 3363 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 CRYGEP-201ENST00000412192 528 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 HCG4B-203ENST00000450128 991 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.24■□□□□ 0.19
PHGDHO43175 RNA5SP415-201ENST00000517246 115 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.24■□□□□ 0.19
PHGDHO43175 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.24■□□□□ 0.19
PHGDHO43175 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PHGDHO43175 MIR3909-201ENST00000579518 119 ntBASIC16.24■□□□□ 0.19
PHGDHO43175 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.24■□□□□ 0.19
PHGDHO43175 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.24■□□□□ 0.19
PHGDHO43175 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.24■□□□□ 0.19
PHGDHO43175 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHGDHO43175 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.23■□□□□ 0.19
PHGDHO43175 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 AC144831.1-201ENST00000573312 2656 ntBASIC16.23■□□□□ 0.19
PHGDHO43175 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.23■□□□□ 0.19
PHGDHO43175 AC092384.3-202ENST00000564646 2873 ntBASIC16.23■□□□□ 0.19
PHGDHO43175 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PHGDHO43175 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHGDHO43175 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.23■□□□□ 0.19
PHGDHO43175 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.23■□□□□ 0.19
PHGDHO43175 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.23■□□□□ 0.19
PHGDHO43175 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
PHGDHO43175 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.23■□□□□ 0.19
PHGDHO43175 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PHGDHO43175 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.23■□□□□ 0.19
PHGDHO43175 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHGDHO43175 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 AC092919.2-201ENST00000623631 1645 ntBASIC16.23■□□□□ 0.19
PHGDHO43175 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHGDHO43175 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms