Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CHD1O14646 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC25.64■■□□□ 1.7
CHD1O14646 NOC2LP1-201ENST00000450578 752 ntBASIC25.64■■□□□ 1.7
CHD1O14646 OARD1-204ENST00000464633 717 ntTSL 2 BASIC25.64■■□□□ 1.7
CHD1O14646 AC005357.2-202ENST00000590507 1060 ntBASIC25.64■■□□□ 1.7
CHD1O14646 WT1-AS_6.1-201ENST00000614919 121 ntBASIC25.64■■□□□ 1.7
CHD1O14646 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHD1O14646 TK1-203ENST00000588734 1681 ntTSL 2 BASIC25.64■■□□□ 1.69
CHD1O14646 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHD1O14646 GGT3P-204ENST00000453783 1664 ntBASIC25.63■■□□□ 1.69
CHD1O14646 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CHD1O14646 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC25.63■■□□□ 1.69
CHD1O14646 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC25.63■■□□□ 1.69
CHD1O14646 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CHD1O14646 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC25.63■■□□□ 1.69
CHD1O14646 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC25.63■■□□□ 1.69
CHD1O14646 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 AL596276.2-201ENST00000447525 331 ntBASIC25.63■■□□□ 1.69
CHD1O14646 AL161670.2-201ENST00000557650 1227 ntBASIC25.63■■□□□ 1.69
CHD1O14646 CMC2-214ENST00000565925 640 ntTSL 5 BASIC25.63■■□□□ 1.69
CHD1O14646 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CHD1O14646 AC022748.3-201ENST00000621828 275 ntBASIC25.63■■□□□ 1.69
CHD1O14646 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD1O14646 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CHD1O14646 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC25.62■■□□□ 1.69
CHD1O14646 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC25.62■■□□□ 1.69
CHD1O14646 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
CHD1O14646 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC25.62■■□□□ 1.69
CHD1O14646 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 NCK2-206ENST00000522586 490 ntTSL 5 BASIC25.62■■□□□ 1.69
CHD1O14646 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC25.62■■□□□ 1.69
CHD1O14646 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CHD1O14646 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC25.62■■□□□ 1.69
CHD1O14646 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC25.62■■□□□ 1.69
CHD1O14646 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC25.62■■□□□ 1.69
CHD1O14646 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CHD1O14646 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHD1O14646 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC25.61■■□□□ 1.69
CHD1O14646 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CHD1O14646 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CHD1O14646 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
CHD1O14646 GAPDHP40-201ENST00000505218 1006 ntBASIC25.61■■□□□ 1.69
CHD1O14646 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC25.61■■□□□ 1.69
CHD1O14646 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CHD1O14646 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD1O14646 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
CHD1O14646 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD1O14646 WDR7-208ENST00000589935 544 ntTSL 4 BASIC25.6■■□□□ 1.69
CHD1O14646 AC132192.2-201ENST00000596206 1147 ntBASIC25.6■■□□□ 1.69
CHD1O14646 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD1O14646 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
CHD1O14646 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CHD1O14646 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC25.6■■□□□ 1.69
CHD1O14646 RN7SL818P-201ENST00000485099 259 ntBASIC25.6■■□□□ 1.69
CHD1O14646 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 RN7SL725P-201ENST00000606439 259 ntBASIC25.6■■□□□ 1.69
CHD1O14646 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC25.6■■□□□ 1.69
CHD1O14646 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
CHD1O14646 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHD1O14646 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms