Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 CYP4F24P-201ENST00000586049 1580 ntBASIC27.26■■□□□ 1.95
CUX2O14529 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 NEFHP1-201ENST00000412845 2629 ntBASIC27.26■■□□□ 1.95
CUX2O14529 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 AC025271.4-201ENST00000621477 1726 ntBASIC27.26■■□□□ 1.95
CUX2O14529 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 ACKR1-201ENST00000368121 1240 ntBASIC27.25■■□□□ 1.95
CUX2O14529 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 AZGP1P1-201ENST00000411909 902 ntBASIC27.25■■□□□ 1.95
CUX2O14529 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC27.25■■□□□ 1.95
CUX2O14529 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC27.25■■□□□ 1.95
CUX2O14529 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC27.25■■□□□ 1.95
CUX2O14529 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC27.25■■□□□ 1.95
CUX2O14529 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC27.25■■□□□ 1.95
CUX2O14529 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC27.25■■□□□ 1.95
CUX2O14529 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CUX2O14529 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC27.25■■□□□ 1.95
CUX2O14529 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC27.25■■□□□ 1.95
CUX2O14529 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC27.25■■□□□ 1.95
CUX2O14529 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC27.25■■□□□ 1.95
CUX2O14529 KLK11-210ENST00000600362 759 ntTSL 3 BASIC27.25■■□□□ 1.95
CUX2O14529 AC006453.4-201ENST00000636949 1252 ntBASIC27.25■■□□□ 1.95
CUX2O14529 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CUX2O14529 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CUX2O14529 CROCCP2-202ENST00000412962 2773 ntBASIC27.25■■□□□ 1.95
CUX2O14529 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC27.24■■□□□ 1.95
CUX2O14529 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC27.24■■□□□ 1.95
CUX2O14529 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CUX2O14529 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CUX2O14529 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
CUX2O14529 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
CUX2O14529 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC27.24■■□□□ 1.95
CUX2O14529 AL590640.2-201ENST00000457038 527 ntBASIC27.24■■□□□ 1.95
CUX2O14529 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CUX2O14529 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC27.24■■□□□ 1.95
CUX2O14529 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC27.24■■□□□ 1.95
CUX2O14529 UBL5-208ENST00000593087 320 ntTSL 3 BASIC27.24■■□□□ 1.95
CUX2O14529 RNF146-211ENST00000609447 607 ntTSL 4 BASIC27.24■■□□□ 1.95
CUX2O14529 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CUX2O14529 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC27.24■■□□□ 1.95
CUX2O14529 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CUX2O14529 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC27.24■■□□□ 1.95
CUX2O14529 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC27.24■■□□□ 1.95
CUX2O14529 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC27.23■■□□□ 1.95
CUX2O14529 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC27.23■■□□□ 1.95
CUX2O14529 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CUX2O14529 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CUX2O14529 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC27.23■■□□□ 1.95
CUX2O14529 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC27.23■■□□□ 1.95
CUX2O14529 AC007663.3-201ENST00000609632 465 ntBASIC27.23■■□□□ 1.95
CUX2O14529 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC27.23■■□□□ 1.95
CUX2O14529 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CUX2O14529 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CUX2O14529 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CUX2O14529 GATB-213ENST00000515812 1893 ntTSL 5 BASIC27.23■■□□□ 1.95
CUX2O14529 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC27.23■■□□□ 1.95
CUX2O14529 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 AL136982.4-201ENST00000437689 1740 ntBASIC27.22■■□□□ 1.95
CUX2O14529 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
CUX2O14529 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC27.22■■□□□ 1.95
CUX2O14529 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC27.22■■□□□ 1.95
CUX2O14529 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CUX2O14529 TEX30-203ENST00000376022 828 ntTSL 2 BASIC27.22■■□□□ 1.95
CUX2O14529 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CUX2O14529 AC026316.1-201ENST00000398900 414 ntBASIC27.22■■□□□ 1.95
CUX2O14529 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC27.22■■□□□ 1.95
CUX2O14529 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC27.22■■□□□ 1.95
CUX2O14529 CEP164P1-201ENST00000455142 418 ntBASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms