Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 AC093503.3-201ENST00000624917 2352 ntBASIC17.07■□□□□ 0.32
SOX1O00570 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 AC098935.1-201ENST00000446057 611 ntBASIC17.07■□□□□ 0.32
SOX1O00570 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.07■□□□□ 0.32
SOX1O00570 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 AC024681.1-201ENST00000521917 487 ntBASIC17.07■□□□□ 0.32
SOX1O00570 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SOX1O00570 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.07■□□□□ 0.32
SOX1O00570 AC145423.3-201ENST00000615987 467 ntBASIC17.07■□□□□ 0.32
SOX1O00570 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.07■□□□□ 0.32
SOX1O00570 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX1O00570 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.06■□□□□ 0.32
SOX1O00570 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SOX1O00570 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.06■□□□□ 0.32
SOX1O00570 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SOX1O00570 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SOX1O00570 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SOX1O00570 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX1O00570 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SOX1O00570 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX1O00570 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SOX1O00570 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SOX1O00570 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SOX1O00570 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SOX1O00570 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX1O00570 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SOX1O00570 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SOX1O00570 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SOX1O00570 ACTG1P2-201ENST00000415776 1125 ntBASIC17.05■□□□□ 0.32
SOX1O00570 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 ACTG1P11-201ENST00000425411 1125 ntBASIC17.05■□□□□ 0.32
SOX1O00570 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX1O00570 FGFR3P1-201ENST00000449999 601 ntBASIC17.05■□□□□ 0.32
SOX1O00570 RN7SL181P-201ENST00000462921 277 ntBASIC17.05■□□□□ 0.32
SOX1O00570 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SOX1O00570 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 AC091544.8-201ENST00000619490 361 ntBASIC17.05■□□□□ 0.32
SOX1O00570 COX6A1P2-201ENST00000620597 330 ntBASIC17.05■□□□□ 0.32
SOX1O00570 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX1O00570 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX1O00570 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms