Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC073439.1-201ENST00000624121 1774 ntBASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC236430.1-201ENST00000402231 743 ntBASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AL031731.1-201ENST00000642131 2094 ntBASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA3F8WFD2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA3F8WFD2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 UGT1A2P-201ENST00000454886 866 ntBASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 AC027369.6-201ENST00000525520 931 ntBASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA3F8WFD2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 HLA-H-201ENST00000383620 1096 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms