Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 SPDYE13P-201ENST00000445314 798 ntBASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AL158047.1-201ENST00000445918 881 ntBASIC11.48□□□□□ -0.57
LINC01546A6NGU7 FAM201B-201ENST00000458407 597 ntBASIC11.48□□□□□ -0.57
LINC01546A6NGU7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 IGHV3-41-201ENST00000613121 348 ntBASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 AP003680.1-201ENST00000598970 3660 ntBASIC11.47□□□□□ -0.57
LINC01546A6NGU7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 AC009090.5-201ENST00000624886 2285 ntBASIC11.47□□□□□ -0.57
LINC01546A6NGU7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 BX640514.1-201ENST00000583223 1918 ntBASIC11.47□□□□□ -0.57
LINC01546A6NGU7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 VENTXP7-201ENST00000475503 772 ntBASIC11.47□□□□□ -0.57
LINC01546A6NGU7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.47□□□□□ -0.57
LINC01546A6NGU7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms