Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC144AA2RUR9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 ARSEP1-201ENST00000420443 635 ntBASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 WFDC1-204ENST00000613603 549 ntBASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC144AA2RUR9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC144AA2RUR9 HTR7P1-202ENST00000624664 4411 ntBASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC136604.1-201ENST00000418535 575 ntBASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC011495.1-201ENST00000498085 584 ntBASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC036164.1-201ENST00000570544 333 ntBASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 REXO1L1P-202ENST00000608646 1974 ntBASIC23.1■■□□□ 1.29
CCDC144AA2RUR9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms