Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC138932.1-201ENST00000534164 6830 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 RNF216P1-203ENST00000404404 2427 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AC005915.1-201ENST00000624912 2018 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AZGP1P1-201ENST00000411909 902 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AC099336.1-201ENST00000417053 1171 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AC084346.2-201ENST00000607097 949 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 MIR6869-201ENST00000619434 62 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 AC012313.1-201ENST00000593393 3059 ntBASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC2Q9Y5Z7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AC004987.2-201ENST00000395959 1148 ntBASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AL359711.2-201ENST00000563105 872 ntBASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 MIR6787-201ENST00000616675 61 ntBASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 AL691432.1-201ENST00000596308 1422 ntBASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 GGT3P-204ENST00000453783 1664 ntBASIC16.85■□□□□ 0.29
HCFC2Q9Y5Z7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC2Q9Y5Z7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC2Q9Y5Z7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HCFC2Q9Y5Z7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC2Q9Y5Z7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.84■□□□□ 0.29
HCFC2Q9Y5Z7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms